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Octopus
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Data Types | |
| type | hamiltonian_elec_t |
Functions/Subroutines | |
| subroutine, public | hamiltonian_elec_init (hm, namespace, space, gr, ions, ext_partners, st, theory_level, xc, mc, kpoints, need_exchange, xc_photons) |
| subroutine, public | hamiltonian_elec_end (hm) |
| logical function | hamiltonian_elec_hermitian (hm) |
| pure logical function | hamiltonian_elec_needs_mgga_term (hm, terms) |
| subroutine | hamiltonian_elec_span (hm, delta, emin, namespace) |
| pure logical function, public | hamiltonian_elec_inh_term (hm) |
| subroutine, public | hamiltonian_elec_set_inh (hm, st) |
| subroutine, public | hamiltonian_elec_remove_inh (hm) |
| subroutine, public | hamiltonian_elec_adjoint (hm) |
| subroutine, public | hamiltonian_elec_not_adjoint (hm) |
| subroutine | hamiltonian_elec_update (this, mesh, namespace, space, ext_partners, time) |
| (re-)build the Hamiltonian for the next application: More... | |
| subroutine, public | hamiltonian_elec_update_pot (this, mesh, accumulate) |
| Update the KS potential of the electronic Hamiltonian. More... | |
| subroutine, public | hamiltonian_elec_epot_generate (this, namespace, space, gr, ions, ext_partners, st, time) |
| real(real64) function, public | hamiltonian_elec_get_time (this) |
| pure logical function, public | hamiltonian_elec_apply_packed (this) |
| subroutine, public | zhamiltonian_elec_apply_atom (hm, namespace, space, latt, species, pos, ia, mesh, psi, vpsi) |
| subroutine, public | hamiltonian_elec_update_with_ext_pot (this, mesh, space, ext_partners, time, mu) |
| This is an extension of "hamiltonian_elec_update_pot" to be used by the CFM4 propagator. It updates the Hamiltonian by considering a weighted sum of the external potentials at times time(1) and time(2), weighted by alpha(1) and alpha(2). More... | |
| logical function, public | hamiltonian_elec_needs_current (hm, states_are_real) |
| subroutine, public | zhamiltonian_elec_apply_all (hm, namespace, gr, st, hst) |
| logical function, public | hamiltonian_elec_has_kick (hm) |
| subroutine | hamiltonian_elec_set_mass (this, namespace, mass) |
| set the effective electron mass, checking whether it was previously redefined. More... | |
| subroutine, public | hamiltonian_elec_copy_and_set_phase (phase, gr, kpt, psib, psib_with_phase) |
| Copy a batch to another batch and apply the Bloch phase to it. More... | |
| subroutine, public | hamiltonian_elec_diagonal (hm, mesh, diag, ik) |
| subroutine | dhamiltonian_elec_apply (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | dhamiltonian_elec_apply_batch (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine | dhamiltonian_elec_external (this, mesh, psib, vpsib) |
| subroutine, public | dhamiltonian_elec_apply_single (hm, namespace, mesh, psi, hpsi, ist, ik, terms, set_bc, set_phase) |
| subroutine | dh_mgga_terms (hm, mesh, psib, hpsib, lapl_psib) |
| Computes the orbital-dependent part of the mGGA potential. More... | |
| subroutine, public | dvmask (mesh, hm, st) |
| subroutine | zhamiltonian_elec_apply (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | zhamiltonian_elec_apply_batch (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | zhamiltonian_elec_external (this, mesh, psib, vpsib) |
| subroutine, public | zhamiltonian_elec_apply_single (hm, namespace, mesh, psi, hpsi, ist, ik, terms, set_bc, set_phase) |
| subroutine | zh_mgga_terms (hm, mesh, psib, hpsib, lapl_psib) |
| Computes the orbital-dependent part of the mGGA potential. More... | |
| subroutine, public | zvmask (mesh, hm, st) |
Variables | |
| integer, parameter, public | length = 1 |
| integer, parameter, public | velocity = 2 |
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_init | ( | type(hamiltonian_elec_t), intent(inout), target | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(space_t), intent(in) | space, | ||
| type(grid_t), intent(inout), target | gr, | ||
| type(ions_t), intent(inout), target | ions, | ||
| type(partner_list_t), intent(inout) | ext_partners, | ||
| type(states_elec_t), intent(inout), target | st, | ||
| integer, intent(in) | theory_level, | ||
| type(xc_t), intent(in), target | xc, | ||
| type(multicomm_t), intent(in) | mc, | ||
| type(kpoints_t), intent(in), target | kpoints, | ||
| logical, intent(in), optional | need_exchange, | ||
| type(xc_photons_t), intent(in), optional, target | xc_photons | ||
| ) |
Definition at line 326 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_end | ( | type(hamiltonian_elec_t), intent(inout), target | hm | ) |
Definition at line 764 of file hamiltonian_elec.F90.
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private |
Definition at line 827 of file hamiltonian_elec.F90.
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private |
Definition at line 839 of file hamiltonian_elec.F90.
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private |
Definition at line 860 of file hamiltonian_elec.F90.
| pure logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_inh_term | ( | type(hamiltonian_elec_t), intent(in) | hm | ) |
Definition at line 882 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_set_inh | ( | type(hamiltonian_elec_t), intent(inout) | hm, |
| type(states_elec_t), intent(in) | st | ||
| ) |
Definition at line 890 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_remove_inh | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 905 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_adjoint | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 919 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_not_adjoint | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 936 of file hamiltonian_elec.F90.
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private |
(re-)build the Hamiltonian for the next application:
Definition at line 954 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_update_pot | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| logical, intent(in), optional | accumulate | ||
| ) |
Update the KS potential of the electronic Hamiltonian.
Adds PCM contributions
Adds possible absorbing potential
Definition at line 1181 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_epot_generate | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| type(namespace_t), intent(in) | namespace, | ||
| class(electron_space_t), intent(in) | space, | ||
| type(grid_t), intent(in) | gr, | ||
| type(ions_t), intent(inout), target | ions, | ||
| type(partner_list_t), intent(in) | ext_partners, | ||
| type(states_elec_t), intent(inout) | st, | ||
| real(real64), intent(in), optional | time | ||
| ) |
Generates the real-space PCM potential due to nuclei which do not change during the SCF calculation.
Local field effects due to static electrostatic potentials (if they were). The laser and the kick are included in subroutine v_ks_hartree (module v_ks).
Definition at line 1281 of file hamiltonian_elec.F90.
| real(real64) function, public hamiltonian_elec_oct_m::hamiltonian_elec_get_time | ( | type(hamiltonian_elec_t), intent(inout) | this | ) |
Definition at line 1364 of file hamiltonian_elec.F90.
| pure logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_apply_packed | ( | class(hamiltonian_elec_t), intent(in) | this | ) |
Definition at line 1372 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_atom | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(space_t), intent(in) | space, | ||
| type(lattice_vectors_t), intent(in) | latt, | ||
| class(species_t), intent(in) | species, | ||
| real(real64), dimension(1:space%dim), intent(in) | pos, | ||
| integer, intent(in) | ia, | ||
| class(mesh_t), intent(in) | mesh, | ||
| complex(real64), dimension(:,:), intent(in) | psi, | ||
| complex(real64), dimension(:,:), intent(out) | vpsi | ||
| ) |
| [in] | psi | (grnp_part, hmddim) |
| [out] | vpsi | (grnp, hmddim) |
Definition at line 1381 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_update_with_ext_pot | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| class(space_t), intent(in) | space, | ||
| type(partner_list_t), intent(in) | ext_partners, | ||
| real(real64), dimension(1:2), intent(in) | time, | ||
| real(real64), dimension(1:2), intent(in) | mu | ||
| ) |
This is an extension of "hamiltonian_elec_update_pot" to be used by the CFM4 propagator. It updates the Hamiltonian by considering a weighted sum of the external potentials at times time(1) and time(2), weighted by alpha(1) and alpha(2).
Definition at line 1414 of file hamiltonian_elec.F90.
| logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_needs_current | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| logical, intent(in) | states_are_real | ||
| ) |
Definition at line 1605 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_all | ( | type(hamiltonian_elec_t), intent(inout) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| type(grid_t), intent(in) | gr, | ||
| type(states_elec_t), intent(inout) | st, | ||
| type(states_elec_t), intent(inout) | hst | ||
| ) |
Definition at line 1623 of file hamiltonian_elec.F90.
| logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_has_kick | ( | type(hamiltonian_elec_t), intent(in) | hm | ) |
Definition at line 1670 of file hamiltonian_elec.F90.
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private |
set the effective electron mass, checking whether it was previously redefined.
Definition at line 1682 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_copy_and_set_phase | ( | type(phase_t), intent(in) | phase, |
| type(grid_t), intent(in) | gr, | ||
| type(distributed_t), intent(in) | kpt, | ||
| type(wfs_elec_t), intent(in) | psib, | ||
| type(wfs_elec_t), intent(out) | psib_with_phase | ||
| ) |
Copy a batch to another batch and apply the Bloch phase to it.
On exist, psib_with_phase is packed If no phase is defined, a packed copy of psib is returned
TODO: This should should probably belong to wfs_elec_t, but cannot due to circular dependencies
| [in] | kpt | k-point distribution |
| [in] | psib | Batched wave functions |
| [out] | psib_with_phase | Batched wave functions with phase applied |
Definition at line 1706 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_diagonal | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| class(mesh_t), intent(in) | mesh, | ||
| real(real64), dimension(:,:), intent(out), contiguous | diag, | ||
| integer, intent(in) | ik | ||
| ) |
| [out] | diag | hpsi(grmeshnp, hmdnspin) |
Definition at line 1737 of file hamiltonian_elec.F90.
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private |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 1848 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dhamiltonian_elec_apply_batch | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(inout), target | psib, | ||
| type(wfs_elec_t), intent(inout), target | hpsib, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc | ||
| ) |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 1877 of file hamiltonian_elec.F90.
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private |
Definition at line 2092 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dhamiltonian_elec_apply_single | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| real(real64), dimension(:,:), intent(inout), target, contiguous | psi, | ||
| real(real64), dimension(:,:), intent(inout), target, contiguous | hpsi, | ||
| integer, intent(in) | ist, | ||
| integer, intent(in) | ik, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc, | ||
| logical, intent(in), optional | set_phase | ||
| ) |
| [in] | ist | the index of the state |
| [in] | ik | the index of the k-point |
| [in,out] | psi | (grmeshnp_part, hmddim) |
| [in,out] | hpsi | (grmeshnp, hmddim) |
Definition at line 2141 of file hamiltonian_elec.F90.
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private |
Computes the orbital-dependent part of the mGGA potential.
This reads as \( L\psi =-\nabla \cdot [\vtau \nabla \psi]\).
It is trivial to show that this operator is self-adjoint. However, this is never the case with finite differences. This is thus reimplemented as L\psi = -1/2(v_\tau \Delta \psi - \psi \Delta[v_\tau] + \Delta [v_\tau \psi]
The same expression was proposed in Richter et al., J. Chem. Phys. 159, 124117 (2023).
Definition at line 2185 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dvmask | ( | class(mesh_t), intent(in) | mesh, |
| type(hamiltonian_elec_t), intent(in) | hm, | ||
| type(states_elec_t), intent(inout) | st | ||
| ) |
Definition at line 2235 of file hamiltonian_elec.F90.
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private |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2339 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_batch | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(inout), target | psib, | ||
| type(wfs_elec_t), intent(inout), target | hpsib, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc | ||
| ) |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2368 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_external | ( | type(hamiltonian_elec_t), intent(in) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(in) | psib, | ||
| type(wfs_elec_t), intent(inout) | vpsib | ||
| ) |
Definition at line 2583 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_single | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| complex(real64), dimension(:,:), intent(inout), target, contiguous | psi, | ||
| complex(real64), dimension(:,:), intent(inout), target, contiguous | hpsi, | ||
| integer, intent(in) | ist, | ||
| integer, intent(in) | ik, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc, | ||
| logical, intent(in), optional | set_phase | ||
| ) |
| [in] | ist | the index of the state |
| [in] | ik | the index of the k-point |
| [in,out] | psi | (grmeshnp_part, hmddim) |
| [in,out] | hpsi | (grmeshnp, hmddim) |
Definition at line 2632 of file hamiltonian_elec.F90.
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private |
Computes the orbital-dependent part of the mGGA potential.
This reads as \( L\psi =-\nabla \cdot [\vtau \nabla \psi]\).
It is trivial to show that this operator is self-adjoint. However, this is never the case with finite differences. This is thus reimplemented as L\psi = -1/2(v_\tau \Delta \psi - \psi \Delta[v_\tau] + \Delta [v_\tau \psi]
The same expression was proposed in Richter et al., J. Chem. Phys. 159, 124117 (2023).
Definition at line 2676 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zvmask | ( | class(mesh_t), intent(in) | mesh, |
| type(hamiltonian_elec_t), intent(in) | hm, | ||
| type(states_elec_t), intent(inout) | st | ||
| ) |
Definition at line 2726 of file hamiltonian_elec.F90.
| integer, parameter, public hamiltonian_elec_oct_m::length = 1 |
Definition at line 318 of file hamiltonian_elec.F90.
| integer, parameter, public hamiltonian_elec_oct_m::velocity = 2 |
Definition at line 318 of file hamiltonian_elec.F90.