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Octopus
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Data Types | |
| type | hamiltonian_elec_t |
Functions/Subroutines | |
| subroutine, public | hamiltonian_elec_init (hm, namespace, space, gr, ions, ext_partners, st, theory_level, xc, mc, kpoints, need_exchange, xc_photons) |
| subroutine, public | hamiltonian_elec_end (hm) |
| subroutine | hamiltonian_elec_release_copy_owned (hm) |
| Release owned pointer targets created by hamiltonian_elec_copy. More... | |
| subroutine, public | hamiltonian_elec_copy (hm_out, hm_in) |
| Deep-copy a hamiltonian_elec_t snapshot. More... | |
| subroutine | hamiltonian_elec_copy_guard_supported (hm_in) |
| Hard-fail guard matrix for unsupported hamiltonian snapshots. More... | |
| logical function | hamiltonian_elec_hermitian (hm) |
| pure logical function | hamiltonian_elec_needs_mgga_term (hm, terms) |
| subroutine | hamiltonian_elec_span (hm, delta, emin, namespace) |
| pure logical function, public | hamiltonian_elec_inh_term (hm) |
| subroutine, public | hamiltonian_elec_set_inh (hm, st) |
| subroutine, public | hamiltonian_elec_remove_inh (hm) |
| subroutine, public | hamiltonian_elec_adjoint (hm) |
| subroutine, public | hamiltonian_elec_not_adjoint (hm) |
| subroutine | hamiltonian_elec_update (this, mesh, namespace, space, ext_partners, time) |
| (re-)build the Hamiltonian for the next application: More... | |
| subroutine, public | hamiltonian_elec_update_pot (this, mesh, accumulate) |
| Update the KS potential of the electronic Hamiltonian. More... | |
| subroutine, public | hamiltonian_elec_epot_generate (this, namespace, space, gr, ions, ext_partners, st, time) |
| real(real64) function, public | hamiltonian_elec_get_time (this) |
| pure logical function, public | hamiltonian_elec_apply_packed (this) |
| subroutine, public | zhamiltonian_elec_apply_atom (hm, namespace, space, latt, species, pos, ia, mesh, psi, vpsi) |
| subroutine, public | hamiltonian_elec_update_with_ext_pot (this, mesh, space, ext_partners, time, mu) |
| This is an extension of "hamiltonian_elec_update_pot" to be used by the CFM4 propagator. It updates the Hamiltonian by considering a weighted sum of the external potentials at times time(1) and time(2), weighted by alpha(1) and alpha(2). More... | |
| logical function, public | hamiltonian_elec_needs_current (hm, states_are_real) |
| subroutine, public | zhamiltonian_elec_apply_all (hm, namespace, gr, st, hst) |
| logical function, public | hamiltonian_elec_has_kick (hm) |
| subroutine | hamiltonian_elec_set_mass (this, namespace, mass) |
| set the effective electron mass, checking whether it was previously redefined. More... | |
| subroutine, public | hamiltonian_elec_diagonal (hm, mesh, diag, ik) |
| subroutine | dhamiltonian_elec_apply (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | dhamiltonian_elec_apply_batch (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine | dhamiltonian_elec_external (this, mesh, psib, vpsib) |
| subroutine, public | dhamiltonian_elec_apply_single (hm, namespace, mesh, psi, hpsi, ist, ik, terms, set_bc, set_phase) |
| subroutine | dh_mgga_terms (hm, mesh, psib, hpsib, lapl_psib) |
| Computes the orbital-dependent part of the mGGA potential. More... | |
| subroutine, public | dvmask (mesh, hm, st) |
| subroutine | zhamiltonian_elec_apply (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | zhamiltonian_elec_apply_batch (hm, namespace, mesh, psib, hpsib, terms, set_bc) |
| subroutine, public | zhamiltonian_elec_external (this, mesh, psib, vpsib) |
| subroutine, public | zhamiltonian_elec_apply_single (hm, namespace, mesh, psi, hpsi, ist, ik, terms, set_bc, set_phase) |
| subroutine | zh_mgga_terms (hm, mesh, psib, hpsib, lapl_psib) |
| Computes the orbital-dependent part of the mGGA potential. More... | |
| subroutine, public | zvmask (mesh, hm, st) |
Variables | |
| integer, parameter, public | length = 1 |
| integer, parameter, public | velocity = 2 |
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_init | ( | type(hamiltonian_elec_t), intent(inout), target | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(space_t), intent(in) | space, | ||
| type(grid_t), intent(inout), target | gr, | ||
| type(ions_t), intent(inout), target | ions, | ||
| type(partner_list_t), intent(inout) | ext_partners, | ||
| type(states_elec_t), intent(inout), target | st, | ||
| integer, intent(in) | theory_level, | ||
| type(xc_t), intent(in), target | xc, | ||
| type(multicomm_t), intent(in) | mc, | ||
| type(kpoints_t), intent(in), target | kpoints, | ||
| logical, intent(in), optional | need_exchange, | ||
| type(xc_photons_t), intent(in), optional, target | xc_photons | ||
| ) |
Definition at line 328 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_end | ( | type(hamiltonian_elec_t), intent(inout), target | hm | ) |
Definition at line 768 of file hamiltonian_elec.F90.
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private |
Release owned pointer targets created by hamiltonian_elec_copy.
This avoids running the full hamiltonian finalizer on shallow-alias snapshots.
Definition at line 853 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_copy | ( | type(hamiltonian_elec_t), intent(out), target | hm_out, |
| type(hamiltonian_elec_t), intent(inout) | hm_in | ||
| ) |
Deep-copy a hamiltonian_elec_t snapshot.
Pointer semantics:
ions is cloned and owned by the copy.der, xc, xc_photons, kpoints) are aliased.zora is cloned when present. Definition at line 902 of file hamiltonian_elec.F90.
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private |
Hard-fail guard matrix for unsupported hamiltonian snapshots.
Definition at line 1024 of file hamiltonian_elec.F90.
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private |
Definition at line 1065 of file hamiltonian_elec.F90.
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private |
Definition at line 1077 of file hamiltonian_elec.F90.
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private |
Definition at line 1098 of file hamiltonian_elec.F90.
| pure logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_inh_term | ( | type(hamiltonian_elec_t), intent(in) | hm | ) |
Definition at line 1120 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_set_inh | ( | type(hamiltonian_elec_t), intent(inout) | hm, |
| type(states_elec_t), intent(in) | st | ||
| ) |
Definition at line 1128 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_remove_inh | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 1143 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_adjoint | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 1157 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_not_adjoint | ( | type(hamiltonian_elec_t), intent(inout) | hm | ) |
Definition at line 1174 of file hamiltonian_elec.F90.
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private |
(re-)build the Hamiltonian for the next application:
Definition at line 1192 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_update_pot | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| logical, intent(in), optional | accumulate | ||
| ) |
Update the KS potential of the electronic Hamiltonian.
Adds PCM contributions
Adds possible absorbing potential
Definition at line 1419 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_epot_generate | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| type(namespace_t), intent(in) | namespace, | ||
| class(electron_space_t), intent(in) | space, | ||
| type(grid_t), intent(in) | gr, | ||
| type(ions_t), intent(inout), target | ions, | ||
| type(partner_list_t), intent(in) | ext_partners, | ||
| type(states_elec_t), intent(inout) | st, | ||
| real(real64), intent(in), optional | time | ||
| ) |
Generates the real-space PCM potential due to nuclei which do not change during the SCF calculation.
Local field effects due to static electrostatic potentials (if they were). The laser and the kick are included in subroutine v_ks_hartree (module v_ks).
Definition at line 1522 of file hamiltonian_elec.F90.
| real(real64) function, public hamiltonian_elec_oct_m::hamiltonian_elec_get_time | ( | type(hamiltonian_elec_t), intent(inout) | this | ) |
Definition at line 1605 of file hamiltonian_elec.F90.
| pure logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_apply_packed | ( | class(hamiltonian_elec_t), intent(in) | this | ) |
Definition at line 1613 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_atom | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(space_t), intent(in) | space, | ||
| type(lattice_vectors_t), intent(in) | latt, | ||
| class(species_t), intent(in) | species, | ||
| real(real64), dimension(1:space%dim), intent(in) | pos, | ||
| integer, intent(in) | ia, | ||
| class(mesh_t), intent(in) | mesh, | ||
| complex(real64), dimension(:,:), intent(in) | psi, | ||
| complex(real64), dimension(:,:), intent(out) | vpsi | ||
| ) |
| [in] | psi | (grnp_part, hmddim) |
| [out] | vpsi | (grnp, hmddim) |
Definition at line 1622 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_update_with_ext_pot | ( | type(hamiltonian_elec_t), intent(inout) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| class(space_t), intent(in) | space, | ||
| type(partner_list_t), intent(in) | ext_partners, | ||
| real(real64), dimension(1:2), intent(in) | time, | ||
| real(real64), dimension(1:2), intent(in) | mu | ||
| ) |
This is an extension of "hamiltonian_elec_update_pot" to be used by the CFM4 propagator. It updates the Hamiltonian by considering a weighted sum of the external potentials at times time(1) and time(2), weighted by alpha(1) and alpha(2).
Definition at line 1655 of file hamiltonian_elec.F90.
| logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_needs_current | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| logical, intent(in) | states_are_real | ||
| ) |
Definition at line 1849 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_all | ( | type(hamiltonian_elec_t), intent(inout) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| type(grid_t), intent(in) | gr, | ||
| type(states_elec_t), intent(inout) | st, | ||
| type(states_elec_t), intent(inout) | hst | ||
| ) |
Definition at line 1867 of file hamiltonian_elec.F90.
| logical function, public hamiltonian_elec_oct_m::hamiltonian_elec_has_kick | ( | type(hamiltonian_elec_t), intent(in) | hm | ) |
Definition at line 1914 of file hamiltonian_elec.F90.
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private |
set the effective electron mass, checking whether it was previously redefined.
Definition at line 1926 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::hamiltonian_elec_diagonal | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| class(mesh_t), intent(in) | mesh, | ||
| real(real64), dimension(:,:), intent(out), contiguous | diag, | ||
| integer, intent(in) | ik | ||
| ) |
| [out] | diag | hpsi(grmeshnp, hmdnspin) |
Definition at line 1944 of file hamiltonian_elec.F90.
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| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2055 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dhamiltonian_elec_apply_batch | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(inout), target | psib, | ||
| type(wfs_elec_t), intent(inout), target | hpsib, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc | ||
| ) |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2084 of file hamiltonian_elec.F90.
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private |
Definition at line 2299 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dhamiltonian_elec_apply_single | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| real(real64), dimension(:,:), intent(inout), target, contiguous | psi, | ||
| real(real64), dimension(:,:), intent(inout), target, contiguous | hpsi, | ||
| integer, intent(in) | ist, | ||
| integer, intent(in) | ik, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc, | ||
| logical, intent(in), optional | set_phase | ||
| ) |
| [in] | ist | the index of the state |
| [in] | ik | the index of the k-point |
| [in,out] | psi | (grmeshnp_part, hmddim) |
| [in,out] | hpsi | (grmeshnp, hmddim) |
Definition at line 2348 of file hamiltonian_elec.F90.
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private |
Computes the orbital-dependent part of the mGGA potential.
This reads as \( L\psi =-\nabla \cdot [\vtau \nabla \psi]\).
It is trivial to show that this operator is self-adjoint. However, this is never the case with finite differences. This is thus reimplemented as L\psi = -1/2(v_\tau \Delta \psi - \psi \Delta[v_\tau] + \Delta [v_\tau \psi]
The same expression was proposed in Richter et al., J. Chem. Phys. 159, 124117 (2023).
Definition at line 2392 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::dvmask | ( | class(mesh_t), intent(in) | mesh, |
| type(hamiltonian_elec_t), intent(in) | hm, | ||
| type(states_elec_t), intent(inout) | st | ||
| ) |
Definition at line 2442 of file hamiltonian_elec.F90.
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private |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2546 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_batch | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(inout), target | psib, | ||
| type(wfs_elec_t), intent(inout), target | hpsib, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc | ||
| ) |
| [in] | set_bc | If set to .false. the boundary conditions are assumed to be set previously. |
Definition at line 2575 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_external | ( | type(hamiltonian_elec_t), intent(in) | this, |
| class(mesh_t), intent(in) | mesh, | ||
| type(wfs_elec_t), intent(in) | psib, | ||
| type(wfs_elec_t), intent(inout) | vpsib | ||
| ) |
Definition at line 2790 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zhamiltonian_elec_apply_single | ( | type(hamiltonian_elec_t), intent(in) | hm, |
| type(namespace_t), intent(in) | namespace, | ||
| class(mesh_t), intent(in) | mesh, | ||
| complex(real64), dimension(:,:), intent(inout), target, contiguous | psi, | ||
| complex(real64), dimension(:,:), intent(inout), target, contiguous | hpsi, | ||
| integer, intent(in) | ist, | ||
| integer, intent(in) | ik, | ||
| integer, intent(in), optional | terms, | ||
| logical, intent(in), optional | set_bc, | ||
| logical, intent(in), optional | set_phase | ||
| ) |
| [in] | ist | the index of the state |
| [in] | ik | the index of the k-point |
| [in,out] | psi | (grmeshnp_part, hmddim) |
| [in,out] | hpsi | (grmeshnp, hmddim) |
Definition at line 2839 of file hamiltonian_elec.F90.
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private |
Computes the orbital-dependent part of the mGGA potential.
This reads as \( L\psi =-\nabla \cdot [\vtau \nabla \psi]\).
It is trivial to show that this operator is self-adjoint. However, this is never the case with finite differences. This is thus reimplemented as L\psi = -1/2(v_\tau \Delta \psi - \psi \Delta[v_\tau] + \Delta [v_\tau \psi]
The same expression was proposed in Richter et al., J. Chem. Phys. 159, 124117 (2023).
Definition at line 2883 of file hamiltonian_elec.F90.
| subroutine, public hamiltonian_elec_oct_m::zvmask | ( | class(mesh_t), intent(in) | mesh, |
| type(hamiltonian_elec_t), intent(in) | hm, | ||
| type(states_elec_t), intent(inout) | st | ||
| ) |
Definition at line 2933 of file hamiltonian_elec.F90.
| integer, parameter, public hamiltonian_elec_oct_m::length = 1 |
Definition at line 320 of file hamiltonian_elec.F90.
| integer, parameter, public hamiltonian_elec_oct_m::velocity = 2 |
Definition at line 320 of file hamiltonian_elec.F90.